Match details

Record ID: NRN_CQ947247
Database: nrnl1 Go to original record
Description: Sequence 48 from Patent WO2004099422. Sequence 24 from Patent WO2004111251. Sequence 26 from Patent WO2005075506. Sequence 49 from patent US 7232899. Adenovirus vector, packaging cell line, composition and method for production and use. ADENOVIRUS PARTICLES WITH ENHANCED INFECTIVITY OF DENDRITIC CELLS AND PARTICLES WITH DECREASED INFECTIVITY OF HEPATOCYTES. VECTORS FOR OCULAR TRANSDUCTION AND USE THEREFOR FOR GENETIC THERAPY. MODIFIED FIBER PROTEINS FOR EFFICIENT RECEPTOR BINDING. Fiber Shaft Modifications for Efficient Targeting. Fiber Shaft Modifications for Efficient Targeting.
Taxon: unidentified
Original size: 11600 bp
Patents: WO2004099422 (lens, espacenet) WO2004111251 (lens, espacenet) WO2005075506 (lens, espacenet) US7232899 (lens, espacenet) US2003157688 (lens, espacenet) JP2002534130 (lens, espacenet) JP2007525166 (lens, espacenet) JP2003531609 (lens, espacenet) JP2007531507 (lens, espacenet) JP2009034109 (lens, espacenet)

View other 1 match for this record


Method: QL-ELE-00-003 Go to GMOMETHODS record
View in JRC GMO-Matrix
Description:Qualitative PCR method for detection of Neomycin phosphotransferase II gene (BVL L 00.00-31, 1998)
Target:nptII

View other 58813 matches for this method


Predicted amplification details:
Mismatches Gaps From To Strand Amplicon size
0 0 6611 6783 + 173 bp

Amplicon: 173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

View other 57974 matches with an identical amplicon


Primers alignment:
Primer/Probe % Identity Length Mismatches Gaps From To Score
primerA 100.0 16 bp 0 0 1 16 1.08e-06
primerB 100.0 16 bp 0 0 173 158 1.08e-06


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.