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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Match details

Record ID: NRN_CQ871363
Database: nrnl1 Go to original record
Description: Sequence 15 from Patent WO2004078983. Sequence 1 from Patent WO2005095117. Sequence 1 from Patent WO2005098121. Use of hydroxypropylated high amylose content potato starches to achieve high kit numbers. Enhanced Amylose Production in Plants. Amylose starch product as sizing agents for textilesizing. Use of hydroxypropylated potato starch forobtaining high kit numbers. Enhanced Amylose Production in Plants. Amylose starch products as sizing agents for textile yarns.
Taxon: unidentified
Original size: 15294 bp
Patents: WO2004078983 (lens, espacenet) WO2005095117 (lens, espacenet) WO2005098121 (lens, espacenet) JP2007532339 (lens, espacenet) JP2006521099 (lens, espacenet) JP2007530809 (lens, espacenet)

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Method: QL-ELE-00-008 Go to GMOMETHODS record
View in JRC GMO-Matrix
Description:Qualitative PCR method for detection of nopaline synthase promoter.
Target:P-nos

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Predicted amplification details:
Mismatches Gaps From To Strand Amplicon size
0 0 7905 7998 + 94 bp
Amplicon: 94 bp 
1     aagcacatac gtcagaaacc attattgcgc gttcaaaagt cgcctaaggt
51    cactatcagc tagcaaatat ttcttgtcaa aaatgctcca ctga

View other 3895 matches with an identical amplicon

Primers and probe alignment:
Primer/Probe % Identity Length Mismatches Gaps From To Score
primerA 100.0 26 bp 0 0 1 26 3.03e-12
primerB 100.0 24 bp 0 0 94 71 3.54e-11
probe 100.0 26 bp 0 0 28 53 3.03e-12

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.