Match details

Record ID: NRN_CS476615
Database: nrnl1 Go to original record
Description: Sequence 14 from Patent WO2006136601. Sequence 84 from Patent WO2007031550. Sequence 110 from Patent WO2006067122. Sequence 53 from Patent WO2006120230. Sequence 127 from Patent WO2007141278. Sequence 49 from Patent WO2007141274. Sequence 141 from Patent WO2008028946. Sequence 110 from patent US 7244430. Human binding molecules having killing activity against staphylococci and uses thereof. Human binding molecules having killing activity against enterococci and uses thereof. Human binding molecules capable of neutralizing influenza virus H5N1 and uses thereof. Sequence 110 from patent US 7537764. Sequence 127 from patent US 7960518. Sequence 53 from patent US 8052974. Sequence 141 from patent US 8192927. Sequence 49 from patent US 8211431. Sequence 127 from patent US 8241631. Sequence 188 from Patent WO2010130636.
Taxon: unidentified
Original size: 10515 bp
Patents: WO2006136601 (lens, espacenet) WO2007031550 (lens, espacenet) WO2006067122 (lens, espacenet) WO2006120230 (lens, espacenet) WO2006120230 (lens, espacenet) WO2007141278 (lens, espacenet) WO2007141278 (lens, espacenet) WO2007141274 (lens, espacenet) WO2007141274 (lens, espacenet) WO2008028946 (lens, espacenet) US7244430 (lens, espacenet) US2007122801 (lens, espacenet) JP2009539360 (lens, espacenet) JP2009542194 (lens, espacenet) JP2010502207 (lens, espacenet) US7537764 (lens, espacenet) US2007042359 (lens, espacenet) US7960518 (lens, espacenet) US8052974 (lens, espacenet) US8192927 (lens, espacenet) US8211431 (lens, espacenet) US8241631 (lens, espacenet) WO2010130636 (lens, espacenet)

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Method: QL-ELE-00-003 Go to GMOMETHODS record
View in JRC GMO-Matrix
Description:Qualitative PCR method for detection of Neomycin phosphotransferase II gene (BVL L 00.00-31, 1998)
Target:nptII

View other 58813 matches for this method


Predicted amplification details:
Mismatches Gaps From To Strand Amplicon size
0 0 7524 7696 + 173 bp

Amplicon: 173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

View other 57974 matches with an identical amplicon


Primers alignment:
Primer/Probe % Identity Length Mismatches Gaps From To Score
primerA 100.0 16 bp 0 0 1 16 1.08e-06
primerB 100.0 16 bp 0 0 173 158 1.08e-06


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.