JRC GMO-Amplicons | EURL GMFF

Record ID:	NRN_AX004880
Database:	nrnl1	Go to original record
Description:	Sequence 1 from Patent WO9910512. Sequence 1 from patent US 6140553. Sequence 1 from patent US 6372963. Sequence 2 from patent US 6483013. Sequence 1 from patent US 6323396. Improved Agrobacterium tumefacience-mediated transformation method of plants. JP 2000509612-A/1: Improved transformation method for plants.
Taxon:	unidentified
Original size:	2345 bp
Patents:	WO9910512 (lens, espacenet) US6140553 (lens, espacenet) US6372963 (lens, espacenet) US6372963 (lens, espacenet) US6483013 (lens, espacenet) US6483013 (lens, espacenet) US6323396 (lens, espacenet) US6323396 (lens, espacenet) JP2001514009 (lens, espacenet) JP2000509612 (lens, espacenet)

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Method:	QL-ELE-00-004	Go to GMOMETHODS record
		View in JRC GMO-Matrix
Description:	Qualitative PCR method for detection of Cauliflower Mosaic Virus 35S promoter (Lipp et al.,2001).
Target:	CaMV P-35S

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Predicted amplification details:

Mismatches	Gaps	From	To	Strand	Amplicon size
0	0	1262	1384	+	123 bp

Amplicon:

123 bp

1     ccacgtcttc aaagcaagtg gattgatgtg acatctccac tgacgtaagg
51    gatgacgcac aatcccacta tccttcgcaa gacccttcct ctatataagg
101   aagttcattt catttggaga gga

View other 3591 matches with an identical amplicon

Primers alignment:

Primer/Probe	% Identity	Length	Mismatches	Gaps	From	To	Score
primerA	100.0	21 bp	0	0	1	21	1.84e-09
primerB	100.0	25 bp	0	0	123	99	1.30e-11

Match details