Match details

Record ID: NRN_AX004550
Database: nrnl1 Go to original record
Description: Sequence 2 from Patent WO9915684. Sequence 2 from Patent WO9915683. Sequence 2 from Patent WO0056910. Sequence 2 from patent US 6808922. Sequence 2 from patent US 7303910. Retrovirus vector containing functional splice donor site and functional splice acceptor site. Method. Retrovirus vector containing functional and non-functional splice donating sites and splice receiving sites. Retroviral vectors comprising functional and non-functionalsplice donor and splice acceptor sites. Retroviral vectors comprising a functional splice donor site anda functional splice acceptor site.
Taxon: unidentified
Original size: 9756 bp
Patents: WO9915684 (lens, espacenet) WO9915683 (lens, espacenet) WO0056910 (lens, espacenet) US6808922 (lens, espacenet) US6808922 (lens, espacenet) US7303910 (lens, espacenet) US2005009186 (lens, espacenet) JP2001517452 (lens, espacenet) JP2001517453 (lens, espacenet) JP2002539797 (lens, espacenet)

View other 1 match for this record


Method: QL-ELE-00-002 Go to GMOMETHODS record
View in JRC GMO-Matrix
Description:Qualitative PCR method for detection of Neomycin phosphotransferase II gene (ISO/FDIS 21569:2005).
Target:nptII

View other 59426 matches for this method


Predicted amplification details:
Mismatches Gaps From To Strand Amplicon size
0 0 7056 7270 + 215 bp

Amplicon: 215 bp
1     ctcaccttgc tcctgccgag aaagtatcca tcatggctga tgcaatgcgg
51    cggctgcata cgcttgatcc ggctacctgc ccattcgacc accaagcgaa
101   acatcgcatc gagcgagcac gtactcggat ggaagccggt cttgtcgatc
151   aggatgatct ggacgaagag catcaggggc tcgcgccagc cgaactgttc
201   gccaggctca aggcg 

View other 57490 matches with an identical amplicon


Primers alignment:
Primer/Probe % Identity Length Mismatches Gaps From To Score
primerA 100.0 21 bp 0 0 1 21 3.06e-09
primerB 100.0 21 bp 0 0 215 195 3.06e-09


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.