Match details
Record ID:
NRN_AX590202
Database:
nrnl1
Go to original record
Description:
Sequence 9 from Patent WO02083888. THE USE OF GENES ENCODING MEMBRANE TRANSPORTER PUMPS TO STIMULATE THE PRODUCTION OF SECONDARY METABOLITES IN BIOLOGICAL CELLS. Sequence 9 from patent US 7622634.
Taxon:
unidentified
Original size:
12789 bp
Patents:
WO02083888 (lens , espacenet )
JP2004529645 (lens , espacenet )
US7622634 (lens , espacenet )
US2004064849
(lens , espacenet )
View other 16 matches for this record
Method:
QL-ELE-00-013
Go to GMOMETHODS record
View in JRC GMO-Matrix
Description: Qualitative duplex PCR method for detection of Cauliflower Mosaic Virus 35S promoter and nopaline synthase terminator (partim T-nos) (Waiblinger et al., 2008).
Target: T-nos
View other 15584 matches for this method
Predicted amplification details:
Mismatches
Gaps
From
To
Strand
Amplicon size
0
0
415
497
-
83 bp
1 catgtaatgc atgacgttat ttatgagatg ggttttttga ttagagtccc
51 gcaattatac atttaatacg cgatagaaaa caa
View other 179 matches with an identical amplicon
Primers and probe alignment:
Primer/Probe
% Identity
Length
Mismatches
Gaps
From
To
Score
primerA
100.0
25 bp
0
0
1
25
9.09e-12
primerB
100.0
25 bp
0
0
83
59
9.09e-12
probe
96.4
28 bp
0
1
28
54
3.76e-11
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.