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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Match details

Record ID: NRN_CS804764
Database: nrnl1 Go to original record
Description: Sequence 101 from Patent WO2007044115. NOVEL IMMUNOADHESINS FOR TREATING AND PREVENTING VIRAL AND BACTERIAL DISEASES. IMPROVED CHIMERIC TOXIN PROTEINS AND CHIMERIC TOXIN RECEPTOR PROTEINS FOR TREATMENT AND PREVENTION OF ANTHRAX. JP 2010241817-A/44: NOVEL IMMUNOADHESINS FOR TREATING AND PREVENTING TOXICITY AND PATHOGEN-MEDIATED DISEASES.
Taxon: unidentified
Original size: 7129 bp
Patents: WO2007044115 (lens, espacenet) JP2005522998 (lens, espacenet) JP2009502205 (lens, espacenet) JP2010241817 (lens, espacenet)

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Method: QL-ELE-00-004 Go to GMOMETHODS record
View in JRC GMO-Matrix
Description:Qualitative PCR method for detection of Cauliflower Mosaic Virus 35S promoter (Lipp et al.,2001).
Target:CaMV P-35S

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Predicted amplification details:
Mismatches Gaps From To Strand Amplicon size
0 0 3077 3199 + 123 bp
Amplicon: 123 bp 
1     ccacgtcttc aaagcaagtg gattgatgtg atatctccac tgacgtaagg
51    gatgacgcac aatcccacta tccttcgcaa gacccttcct ctatataagg
101   aagttcattt catttggaga gga

View other 3472 matches with an identical amplicon

Primers alignment:
Primer/Probe % Identity Length Mismatches Gaps From To Score
primerA 100.0 21 bp 0 0 1 21 1.84e-09
primerB 100.0 25 bp 0 0 123 99 1.30e-11

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.