Match details

Record ID: NRN_AX032414
Database: nrnl1 Go to original record
Description: Sequence 3 from Patent EP1005870. Sequence 3 from patent US 5736137. Sequence 3 from patent US 5843439. Sequence 3 from patent US 6399061. Sequence 58 from patent US 7125843. Sequence 58 from patent US 7138371. Sequence 58 from patent US 7157277. Sequence 58 from patent US 7173003. Sequence 58 from patent US 7179617. Sequence 58 from patent US 7226903. Sequence 58 from patent US 7265084. Sequence 58 from patent US 7265085. Sequence 58 from patent US 7276475. Sequence 58 from patent US 7297511. Sequence 2 from patent US 7381560. GLYCOPEGYLATION METHODS AND PROTEINS/PEPTIDES PRODUCED BY THE METHODS. REMODELING AND GLYCOCONJUGATION OF PEPTIDES. ERYTHROPOIETIN: REMODELING AND GLYCOCONJUGATION OF ERYTHROPOIETIN. REMODELING AND GLYCOCONJUGATION OF PEPTIDES. Sequence 58 from patent US 7399613. Sequence 58 from patent US 7416858. Sequence 58 from patent US 7439043. Sequence 58 from Patent EP2042196. Sequence 58 from Patent EP2055189. Sequence 58 from patent US 7473680. Sequence 2 from patent US 7422739. Sequence 58 from patent US 7696163. Sequence 2 from patent US 7744877. Sequence 58 from patent US 7795210. Sequence 58 from patent US 8008252. Sequence 58 from patent US 8063015. Sequence 58 from patent US 8076292. Sequence 58 from Patent EP2080525. JP 2010120954-A/25: REMODELING AND GLYCOCONJUGATION OF PEPTIDES. JP 2011006479-A/25: REMODELING AND GLYCOCONJUGATION OF PEPTIDES. Sequence 58 from Patent EP2298354. Sequence 58 from Patent EP2305311. Sequence 58 from Patent EP2305312. Sequence 58 from Patent EP2305313. Sequence 58 from Patent EP2305314. Sequence 58 from Patent EP2292271. Sequence 58 from Patent EP2292273. Sequence 58 from Patent EP2279754. Sequence 58 from Patent EP2279755. Sequence 58 from Patent EP2279753. Sequence 58 from Patent EP2322229.
Taxon: unidentified
Original size: 9209 bp
Patents: EP1005870 (lens, espacenet) US5736137 (lens, espacenet) US5843439 (lens, espacenet) US6399061 (lens, espacenet) US6399061 (lens, espacenet) US7125843 (lens, espacenet) US2004043446 (lens, espacenet) US7138371 (lens, espacenet) US2004137557 (lens, espacenet) US7157277 (lens, espacenet) US2004126838 (lens, espacenet) US7173003 (lens, espacenet) US2004077836 (lens, espacenet) US7179617 (lens, espacenet) US2005100982 (lens, espacenet) US7226903 (lens, espacenet) US2004115168 (lens, espacenet) US7265084 (lens, espacenet) US2004132640 (lens, espacenet) US7265085 (lens, espacenet) US2004142856 (lens, espacenet) US7276475 (lens, espacenet) US2006287223 (lens, espacenet) US7297511 (lens, espacenet) US2004082026 (lens, espacenet) US7381560 (lens, espacenet) US2003095963 (lens, espacenet) JP2007525941 (lens, espacenet) JP2005521635 (lens, espacenet) JP2006522738 (lens, espacenet) JP2009108087 (lens, espacenet) US7399613 (lens, espacenet) US2005031584 (lens, espacenet) US7416858 (lens, espacenet) US2005106658 (lens, espacenet) US7439043 (lens, espacenet) US2008206808 (lens, espacenet) EP2042196 (lens, espacenet) EP2055189 (lens, espacenet) US7473680 (lens, espacenet) US2006030521 (lens, espacenet) US7422739 (lens, espacenet) US2002197255 (lens, espacenet) US7696163 (lens, espacenet) US7744877 (lens, espacenet) US7795210 (lens, espacenet) US8008252 (lens, espacenet) US8063015 (lens, espacenet) US8076292 (lens, espacenet) EP2080525 (lens, espacenet) JP2010120954 (lens, espacenet) JP2011006479 (lens, espacenet) EP2298354 (lens, espacenet) EP2305311 (lens, espacenet) EP2305312 (lens, espacenet) EP2305313 (lens, espacenet) EP2305314 (lens, espacenet) EP2292271 (lens, espacenet) EP2292273 (lens, espacenet) EP2279754 (lens, espacenet) EP2279755 (lens, espacenet) EP2279753 (lens, espacenet) EP2322229 (lens, espacenet)

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Method: QL-ELE-00-002 Go to GMOMETHODS record
View in JRC GMO-Matrix
Description:Qualitative PCR method for detection of Neomycin phosphotransferase II gene (ISO/FDIS 21569:2005).
Target:nptII

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Predicted amplification details:
Mismatches Gaps From To Strand Amplicon size
0 0 6231 6445 + 215 bp

Amplicon: 215 bp
1     ctcaccttgc tcctgccgag aaagtatcca tcatggctga tgcaatgcgg
51    cggctgcata cgcttgatcc ggctacctgc ccattcgacc accaagcgaa
101   acatcgcatc gagcgagcac gtactcggat ggaagccggt cttgtcgatc
151   aggatgatct ggacgaagag catcaggggc tcgcgccagc cgaactgttc
201   gccaggctca aggcg 

View other 57490 matches with an identical amplicon


Primers alignment:
Primer/Probe % Identity Length Mismatches Gaps From To Score
primerA 100.0 21 bp 0 0 1 21 3.06e-09
primerB 100.0 21 bp 0 0 215 195 3.06e-09


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.