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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Match details

Record ID: NRN_AR134669
Database: nrnl1 Go to original record
Description: Sequence 9 from patent US 6194168. Sequence 9 from patent US 6420138. Sequence 37 from patent US 6495129. Sequence 56 from patent US 6811773. Sequence 56 from patent US 7041460. Sequence 12 from patent US 7094573. Sequence 56 from patent US 7364865. Therapeutic compositions and methods for treating disease states with myeloid progenitor inhibitory factor-1 (MPIF-1), monocyte colony inhibitory factor(M-CIF), and macrophage inhibitory factor-4 (MIP-4). Methods of Treating or Preventing Cell, Tissue, and Organ Damage Using Human Myeloid Progenitor Inhibitory Factor-1 (MPIF-1). Sequence 12 from patent US 7405059.
Taxon: unidentified
Original size: 4208 bp
Patents: US6194168 (lens, espacenet) US6194168 (lens, espacenet) US6420138 (lens, espacenet) US2002037587 (lens, espacenet) US6495129 (lens, espacenet) US6495129 (lens, espacenet) US6811773 (lens, espacenet) US6811773 (lens, espacenet) US7094573 (lens, espacenet) US2005153339 (lens, espacenet) US7364865 (lens, espacenet) US2006228359 (lens, espacenet) JP2001500382 (lens, espacenet) JP2003516934 (lens, espacenet) US7405059 (lens, espacenet) US2006216787 (lens, espacenet)

View other 1 match for this record

Method: QL-ELE-00-003 Go to GMOMETHODS record
View in JRC GMO-Matrix
Description:Qualitative PCR method for detection of Neomycin phosphotransferase II gene (BVL L 00.00-31, 1998)
Target:nptII

View other 58813 matches for this method

Predicted amplification details:
Mismatches Gaps From To Strand Amplicon size
0 0 3387 3559 - 173 bp
Amplicon: 173 bp 
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc

View other 57974 matches with an identical amplicon

Primers alignment:
Primer/Probe % Identity Length Mismatches Gaps From To Score
primerA 100.0 16 bp 0 0 1 16 1.08e-06
primerB 100.0 16 bp 0 0 173 158 1.08e-06

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.