Match details
Record ID:
NRN_AR020969
Database:
nrnl1
Go to original record
Description:
Sequence 1 from patent US 5789245. Sequence 1 from patent US 5814482. Sequence 1 from patent US 5843723. Sequence 1 from patent US 6342372. Sequence 1 from patent US 6376236. Sequence 1 from patent US 7572628. Sequence 1 from patent US 7977091.
Taxon:
unidentified
Original size:
16656 bp
Patents:
US5789245 (lens , espacenet )
US5814482 (lens , espacenet )
US5843723 (lens , espacenet )
US6342372 (lens , espacenet )
US6342372 (lens , espacenet )
US6376236 (lens , espacenet )
US6376236 (lens , espacenet )
US7572628 (lens , espacenet )
US2003232035 (lens , espacenet )
US7977091 (lens , espacenet )
View other 1 match for this record
View other 58813 matches for this method
Predicted amplification details:
Mismatches
Gaps
From
To
Strand
Amplicon size
0
0
13193
13365
+
173 bp
1 ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51 ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101 gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151 cggtcttgtc gatcaggatg atc
View other 57974 matches with an identical amplicon
Primer/Probe
% Identity
Length
Mismatches
Gaps
From
To
Score
primerA
100.0
16 bp
0
0
1
16
1.08e-06
primerB
100.0
16 bp
0
0
173
158
1.08e-06
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.