Match details
Record ID:
NRN_CS052224
Database:
nrnl1
Go to original record
Description:
Sequence 3 from Patent WO2005019449. Sequence 10 from patent US 7119192. Stress Inducible Promoter derived from Oryza sativa. Stress Inducible Promoter derived from Oryza sativa. Sequence 3 from patent US 7696406. Sequence 6 from Patent WO2011158242.
Taxon:
unidentified
Original size:
835 bp
Patents:
WO2005019449 (lens , espacenet )
US7119192 (lens , espacenet )
US2005278799 (lens , espacenet )
JP2004248638 (lens , espacenet )
US7696406 (lens , espacenet )
WO2011158242 (lens , espacenet )
View other 6 matches for this record
View other 10854 matches for this method
Predicted amplification details:
Mismatches
Gaps
From
To
Strand
Amplicon size
0
0
586
780
+
195 bp
1 gctcctacaa atgccatcat tgcgataaag gaaaggccat cgttgaagat
51 gcctctgccg acagtggtcc caaagatgga cccccaccca cgaggagcat
101 cgtggaaaaa gaagacgttc caaccacgtc ttcaaagcaa gtggattgat
151 gtgatatctc cactgacgta agggatgacg cacaatccca ctatc
View other 8169 matches with an identical amplicon
Primer/Probe
% Identity
Length
Mismatches
Gaps
From
To
Score
primerA
100.0
19 bp
0
0
1
19
3.10e-08
primerB
100.0
20 bp
0
0
195
176
9.28e-09
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.