Match details
Record ID: NRN_AR110600
Database:
nrnl1
Go to original record
Description:
Sequence 7 from patent US 6114608. Sequence 7 from patent US 6229075. Sequence 7 from patent US 6232533. Sequence 7 from patent US 6232534. Sequence 7 from patent US 6342660. Sequence 7 from patent US 6399860. Sequence 7 from patent US 6573438.
Taxon:
unidentified
Original size:
568 bp
Patents:
US6114608 (lens , espacenet )
US6229075 (lens , espacenet )
US6229075 (lens , espacenet )
US6232533 (lens , espacenet )
US6232533 (lens , espacenet )
US6232534 (lens , espacenet )
US6232534 (lens , espacenet )
US6342660 (lens , espacenet )
US6342660 (lens , espacenet )
US6399860 (lens , espacenet )
US6399860 (lens , espacenet )
US6573438 (lens , espacenet )
US6573438 (lens , espacenet )
View other 2 matches for this record
View other 1579 matches for this method
Predicted amplification details:
Mismatches
Gaps
From
To
Strand
Amplicon size
0
0
196
263
+
68 bp
1 ttgagggtgt tgtggctggt attgcttacg ctgggccctg gaaggctagg
51 aacgcttacg attggaca
View other 1562 matches with an identical amplicon
Primers and probe alignment:
Primer/Probe
% Identity
Length
Mismatches
Gaps
From
To
Score
primerA
100.0
21 bp
0
0
1
21
9.83e-10
primerB
100.0
21 bp
0
0
68
48
9.83e-10
probe
100.0
22 bp
0
0
44
23
2.90e-10
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.
