Match details
Record ID: NRN_AR014742
Database:
nrnl1
Go to original record
Description:
Sequence 9 from patent US 5773701. Sequence 9 from patent US 5792937. Sequence 1 from patent US 5804425. Sequence 4 from patent US 5986175. Sequence 1 from patent US 7183110. Sequence 4 from patent US 5503999. Sequence 17 from patent US 5512466. Sequence 5 from patent US 5589612. Sequence 1 from patent US 5633435. Sequence 1 from patent US 5627061. Sequence 17 from patent US 5702933.
Taxon:
unidentified
Original size:
597 bp
Patents:
US5773701 (lens , espacenet )
US5792937 (lens , espacenet )
US5804425 (lens , espacenet )
US5986175 (lens , espacenet )
US7183110 (lens , espacenet )
US2002168680 (lens , espacenet )
US5503999 (lens , espacenet )
US5512466 (lens , espacenet )
US5589612 (lens , espacenet )
US5633435 (lens , espacenet )
US5627061 (lens , espacenet )
US5702933 (lens , espacenet )
View other 1 match for this record
View other 631 matches for this method
Predicted amplification details:
Mismatches
Gaps
From
To
Strand
Amplicon size
0
0
453
530
+
78 bp
1 caaaataacg tggaaaagag ctgtcctgac agcccactca ctaatgcgta
51 tgacgaacgc agtgacgacc acaaaaga
View other 445 matches with an identical amplicon
Primers and probe alignment:
Primer/Probe
% Identity
Length
Mismatches
Gaps
From
To
Score
primerA
100.0
22 bp
0
0
1
22
3.36e-10
primerB
100.0
20 bp
0
0
78
59
3.84e-09
probe
100.0
22 bp
0
0
26
47
3.36e-10
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.
