European Commission logo
Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Match details

Record ID: NRN_HV571048
Database: nrnl1 Go to original record
Description: JP 2012501190-A/13: PLANT GLUTAMINE PHENYLPYRUVATE TRANSAMINASE GENE AND TRANSGENIC PLANTS CARRYING SAME. JP 2012501191-A/16: Transgenic Plants with Enhanced Growth Characteristics. Sequence 22 from Patent EP2328405. Sequence 27 from Patent EP2334166.
Taxon: unidentified
Original size: 1868 bp
Patents: JP2012501190 (lens, espacenet) JP2012501191 (lens, espacenet) EP2328405 (lens, espacenet) EP2334166 (lens, espacenet)

View other 6 matches for this record

Method: QL-ELE-00-004 Go to GMOMETHODS record
View in JRC GMO-Matrix
Description:Qualitative PCR method for detection of Cauliflower Mosaic Virus 35S promoter (Lipp et al.,2001).
Target:CaMV P-35S

View other 10536 matches for this method

Predicted amplification details:
Mismatches Gaps From To Strand Amplicon size
1 0 405 527 + 123 bp
Amplicon: 123 bp 
1     ccacgtcttc aaagcaagtg gattgatgtg atatctccac tgacgtaagg
51    gatgacgcac aatcccacta tccttcgcaa gacccttcct ctatataagg
101   aagttcattt catttggaga gaa

View other 1220 matches with an identical amplicon

Primers alignment:
Primer/Probe % Identity Length Mismatches Gaps From To Score
primerA 100.0 21 bp 0 0 1 21 1.84e-09
primerB 100.0 23 bp 0 0 121 99 1.68e-10

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.