Match details
Record ID:
NRN_HH931606
Database:
nrnl1
Go to original record
Description:
Sequence 96 from Patent EP2235185. JP 2011507547-A/83: Woody plants having improved growth characteristics and method for making the same using transcription factors.
Taxon:
unidentified
Original size:
11135 bp
Patents:
EP2235185 (lens , espacenet )
JP2011507547 (lens , espacenet )
View other 16 matches for this record
View other 1572 matches for this method
Predicted amplification details:
Mismatches
Gaps
From
To
Strand
Amplicon size
0
0
10745
10884
-
140 bp
1 ttcccctcgg tatccaatta gagtctcata ttcactctca actcgatcga
51 ggcatgattg aacaagatgg attgcacgca ggttctccgg ccgcttgggt
101 ggagaggcta ttcggctatg actgggcaca acagacaatc
View other 151 matches with an identical amplicon
Primers and probe alignment:
Primer/Probe
% Identity
Length
Mismatches
Gaps
From
To
Score
primerA
100.0
23 bp
0
0
1
23
1.72e-10
primerB
100.0
22 bp
0
0
140
119
5.81e-10
probe
100.0
25 bp
0
0
117
93
1.48e-11
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.