Match details
Record ID:
NRN_GM979710
Database:
nrnl1
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Description:
Sequence 114 from Patent WO2008147935. Sequence 114 from patent US 8143473. Sequence 205 from patent US 8143476. Sequence 333 from patent US 8153859. Sequence 333 from Patent WO2009143401. Sequence 205 from Patent WO2009143398.
Taxon:
unidentified
Original size:
10303 bp
Patents:
WO2008147935 (lens , espacenet )
US8143473 (lens , espacenet )
US8143476 (lens , espacenet )
US8153859 (lens , espacenet )
WO2009143401 (lens , espacenet )
WO2009143398 (lens , espacenet )
View other 11 matches for this record
View other 10854 matches for this method
Predicted amplification details:
Mismatches
Gaps
From
To
Strand
Amplicon size
0
0
1105
1299
+
195 bp
1 gctcctacaa atgccatcat tgcgataaag gaaaggctat cattcaagat
51 gcctctgccg acagtggtcc caaagatgga cccccaccca cgaggagcat
101 cgtggaaaaa gaagacgttc caaccacgtc ttcaaagcaa gtggattgat
151 gtgacatctc cactgacgta agggatgacg cacaatccca ctatc
View other 4409 matches with an identical amplicon
Primer/Probe
% Identity
Length
Mismatches
Gaps
From
To
Score
primerA
100.0
19 bp
0
0
1
19
3.10e-08
primerB
100.0
20 bp
0
0
195
176
9.28e-09
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.