Match details

Record ID: NRN_FB706319
Database: nrnl1 Go to original record
Description: Sequence 26 from Patent WO2007127381. MUTANT DELTA-8 DESATURASE GENES ENGINEERED BY TARGETED MUTAGENSIS AND THEIR USE IN MAKING POLYUNSATURATED FATTY ACIDS. Sequence 68 from Patent WO2008063340. Sequence 185 from Patent WO2008073271. Sequence 185 from Patent WO2008073275. Sequence 185 from patent US 7709239. Sequence 68 from patent US 7863502. Sequence 26 from patent US 7943823. Sequence 185 from patent US 8017838. Sequence 185 from patent US 8026089. Sequence 26 from patent US 8058517. Sequence 26 from Patent EP2405012.
Taxon: unidentified
Original size: 7887 bp
Patents: WO2007127381 (lens, espacenet) WO2007127381 (lens, espacenet) JP2010512146 (lens, espacenet) WO2008063340 (lens, espacenet) WO2008073271 (lens, espacenet) WO2008073275 (lens, espacenet) US7709239 (lens, espacenet) US7863502 (lens, espacenet) US7943823 (lens, espacenet) US8017838 (lens, espacenet) US8026089 (lens, espacenet) US8058517 (lens, espacenet) EP2405012 (lens, espacenet)

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Method: QL-ELE-00-004 Go to GMOMETHODS record
View in JRC GMO-Matrix
Description:Qualitative PCR method for detection of Cauliflower Mosaic Virus 35S promoter (Lipp et al.,2001).
Target:CaMV P-35S

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Predicted amplification details:
Mismatches Gaps From To Strand Amplicon size
0 0 3178 3300 + 123 bp

Amplicon: 123 bp
1     ccacgtcttc aaagcaagtg gattgatgtg acatctccac tgacgtaagg
51    gatgacgcac aatcccacta tccttcgcaa gacccttcct ctatataagg
101   aagttcattt catttggaga gga 

View other 3591 matches with an identical amplicon


Primers alignment:
Primer/Probe % Identity Length Mismatches Gaps From To Score
primerA 100.0 21 bp 0 0 1 21 1.84e-09
primerB 100.0 25 bp 0 0 123 99 1.30e-11


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.