Match details
Record ID: |
JN952308.1 |
Database: |
emblreltgn |
Go to original record |
Description: |
Mus musculus targeted non-conditional, lacZ-tagged mutant allele Ppargc1a:tm1e(EUCOMM)Wtsi; transgenic. |
Taxon: |
Mus musculus |
Original size: |
38058 bp |
View other 3 matches for this record
View other 58813 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
21066 |
21238 |
+ |
173 bp |
|
1 ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51 ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101 gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151 cggtcttgtc gatcaggatg atc
View other 57974 matches with an identical amplicon
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
16 bp |
0 |
0 |
1 |
16 |
1.08e-06 |
primerB |
100.0 |
16 bp |
0 |
0 |
173 |
158 |
1.08e-06 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.