Match details
| Record ID: |
GX747623.1 |
| Database: |
emblrelpat |
Go to original record |
| Description: |
Sequence 15802 from patent US 7834146. |
| Taxon: |
unidentified |
| Original size: |
1529 bp |
| Patents: |
US7834146 (lens, espacenet)
|
| Method: |
QT-TAX-ZM-004 |
Go to GMOMETHODS record |
| Description: | Quantitative PCR method for detection of maize aldolase 1 gene. |
| Target: | maize aldolase 1 |
View other 211 matches for this method
| Predicted amplification details: |
| Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
| 1 |
0 |
335 |
403 |
- |
69 bp |
|
1 agggaggacg cctccctcct tgaggacatc gacaaaaggc ttgccatcct
51 tggtcttctg gtagagggt
View other 29 matches with an identical amplicon
| Primers and probe alignment: |
| Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
| primerA |
100.0 |
17 bp |
0 |
0 |
1 |
17 |
1.38e-07 |
| primerB |
95.5 |
22 bp |
1 |
0 |
69 |
48 |
1.37e-08 |
| probe |
96.2 |
26 bp |
1 |
0 |
21 |
46 |
1.01e-10 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.
