Match details
Record ID: |
GX276555.1 |
Database: |
emblrelpat |
Go to original record |
Description: |
Sequence 13 from patent US 7732660. |
Taxon: |
unidentified |
Original size: |
18691 bp |
Patents: |
US7732660 (lens, espacenet)
|
View other 15 matches for this record
View other 1572 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
392 |
561 |
+ |
170 bp |
|
1 ttcccctcgg tatccaatta gagtctcata ttcactctca atccaaataa
51 tctgcaatgg caattacctt atccgcaact tctttaccta tttccgcccg
101 gatccgggca ggttctccgg ccgcttgggt ggagaggcta ttcggctatg
151 actgggcaca acagacaatc
View other 96 matches with an identical amplicon
Primers and probe alignment: |
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
23 bp |
0 |
0 |
1 |
23 |
2.10e-10 |
primerB |
100.0 |
22 bp |
0 |
0 |
170 |
149 |
7.11e-10 |
probe |
100.0 |
25 bp |
0 |
0 |
147 |
123 |
1.82e-11 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.