Match details
Record ID: |
GV649159.1 |
Database: |
emblrelpat |
Go to original record |
Description: |
Sequence 141 from patent US 7663028. |
Taxon: |
unidentified |
Original size: |
662 bp |
Patents: |
US7663028 (lens, espacenet)
|
View other 1054 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
170 |
256 |
+ |
87 bp |
|
1 tttttattcg gttttcgcta tcgaactgtg aaatggaaat ggatggagaa
51 gagttaatga atgatatggt ccttttgttc attctca
View other 1026 matches with an identical amplicon
Primers and probe alignment: |
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
23 bp |
0 |
0 |
1 |
23 |
1.11e-10 |
primerB |
100.0 |
26 bp |
0 |
0 |
87 |
62 |
2.79e-12 |
probe |
100.0 |
36 bp |
0 |
0 |
60 |
25 |
1.09e-17 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.