Match details
Record ID:
DI095860.1
Database:
emblrelpat
Go to original record
Description:
METHOD FOR PRODUCING CAROTENOIDS OR THEIR PRECURSORS USINGGENETICALLY MODIFIED ORGANISMS OF THE BLAKESLEA GENUS,CAROTENOIDS OR THEIR PRECURSORS PRODUCED BY SAID METHOD ANDUSE THEREOF.
Taxon:
unidentified
Original size:
15739 bp
View other 9 matches for this record
View other 1572 matches for this method
Predicted amplification details:
Mismatches
Gaps
From
To
Strand
Amplicon size
0
0
6023
6185
-
163 bp
1 ttcccctcgg tatccaatta gagtctcata ttcactctca atccaaataa
51 tctgcaccgg atctggatcg tttcgcatga ttgaacaaga tggattgcac
101 gcaggttctc cggccgcttg ggtggagagg ctattcggct atgactgggc
151 acaacagaca atc
View other 978 matches with an identical amplicon
Primers and probe alignment:
Primer/Probe
% Identity
Length
Mismatches
Gaps
From
To
Score
primerA
100.0
23 bp
0
0
1
23
2.01e-10
primerB
100.0
22 bp
0
0
163
142
6.81e-10
probe
100.0
25 bp
0
0
140
116
1.74e-11
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.