Match details
Record ID:
DD360042.1
Database:
emblrelpat
Go to original record
Description:
Method for the genetic modification of organisms of the genus Blakeslea, corresponding organisms, and use of the same. CC PR 09-JAN-2003 10300649.4,08-SEP-2003 10341272.7
Taxon:
unidentified
Original size:
17593 bp
Patents:
JP2006513729 (lens , espacenet )
View other 9 matches for this record
View other 1572 matches for this method
Predicted amplification details:
Mismatches
Gaps
From
To
Strand
Amplicon size
0
0
14670
14832
-
163 bp
1 ttcccctcgg tatccaatta gagtctcata ttcactctca atccaaataa
51 tctgcaccgg atctggatcg tttcgcatga ttgaacaaga tggattgcac
101 gcaggttctc cggccgcttg ggtggagagg ctattcggct atgactgggc
151 acaacagaca atc
View other 978 matches with an identical amplicon
Primers and probe alignment:
Primer/Probe
% Identity
Length
Mismatches
Gaps
From
To
Score
primerA
100.0
23 bp
0
0
1
23
2.01e-10
primerB
100.0
22 bp
0
0
163
142
6.81e-10
probe
100.0
25 bp
0
0
140
116
1.74e-11
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.