Match details
| Record ID: |
DI389542.1 |
| Database: |
emblrelpat |
Go to original record |
| Description: |
KR 1020140007352-A/27: STACKED HERBICIDE TOLERANCE EVENT 8264.44.06.1, RELATED TRANSGENIC SOYBEAN LINES, AND DETECTION THEREOF. |
| Taxon: |
synthetic construct |
| Original size: |
13659 bp |
| Patents: |
KR1020140007352 (lens, espacenet)
|
View other 4 matches for this record
View other 13 matches for this method
| Predicted amplification details: |
| Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
| 0 |
0 |
1435 |
1533 |
+ |
99 bp |
|
1 ttattgttct tgttgtttcc tctttaggaa cttacatgta aacggtaagg
51 tcatcatgga ggtccgaata gtttgaaatt agaaagctcg caattgagg
View other 13 matches with an identical amplicon
| Primers and probe alignment: |
| Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
| primerA |
100.0 |
28 bp |
0 |
0 |
1 |
28 |
2.56e-13 |
| primerB |
100.0 |
24 bp |
0 |
0 |
99 |
76 |
3.74e-11 |
| probe |
100.0 |
29 bp |
0 |
0 |
69 |
41 |
7.45e-14 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.
