Match details
Record ID: |
DI244167.1 |
Database: |
emblrelpat |
Go to original record |
Description: |
KR 1020120107974-A/1: DETECTION OF AAD-12 SOYBEAN EVENT 416. |
Taxon: |
artificial sequences |
Original size: |
10212 bp |
Patents: |
KR1020120107974 (lens, espacenet)
|
View other 3 matches for this record
View other 18 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
9073 |
9202 |
+ |
130 bp |
|
1 gtacattaaa aacgtccgca atgtgttatt aagttgtcta agcgtcaata
51 ttttaattct taacaatcaa tattttaatt cttaaacttt attaaatcta
101 acaataaact gtaagaacta attcttaaac
View other 18 matches with an identical amplicon
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
26 bp |
0 |
0 |
1 |
26 |
4.02e-12 |
primerB |
100.0 |
33 bp |
0 |
0 |
130 |
98 |
6.97e-16 |
primerB |
100.0 |
12 bp |
0 |
0 |
87 |
76 |
3.29e-04 |
probe |
100.0 |
22 bp |
0 |
0 |
29 |
50 |
5.76e-10 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.