Match details
Record ID: |
MP782883.1 |
Database: |
emblrelpat |
Go to original record |
Description: |
Sequence 10 from Patent EP3717650. |
Taxon: |
synthetic construct |
Original size: |
16068 bp |
Patents: |
EP3717650 (lens, espacenet)
|
View other 10 matches for this record
View other 5 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
958 |
1073 |
+ |
116 bp |
|
1 cgagacagac tcaatgtatc cgagatactc ttgtttggtt acacttgcaa
51 aaatagacca ctcttgtttg gtttcatgtc cgggaaatct acatggatca
101 gcaatgagta tgatgg
View other 5 matches with an identical amplicon
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
30 bp |
0 |
0 |
1 |
30 |
2.56e-14 |
primerB |
100.0 |
27 bp |
0 |
0 |
116 |
90 |
1.04e-12 |
probe |
100.0 |
30 bp |
0 |
0 |
85 |
56 |
2.56e-14 |
probe |
100.0 |
14 bp |
0 |
0 |
40 |
27 |
2.00e-05 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.