Match details
Record ID: |
MP558632.1 |
Database: |
emblrelpat |
Go to original record |
Description: |
Sequence 2 from Patent EP3624581. |
Taxon: |
synthetic construct |
Original size: |
13890 bp |
Patents: |
EP3624581 (lens, espacenet)
|
View other 13 matches for this record
View other 1572 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
257 |
448 |
+ |
192 bp |
|
1 ttcccctcgg tatccaatta gagtctcata ttcactcgac ttttacaaca
51 attaccaaca acaacaaaca acaaacaaca ttacaattac tatttacaat
101 tatccatggt tgaacaagat ggattgcacg caggttctcc ggccgcttgg
151 gtggagaggc tattcggcta tgactgggca caacagacaa tc
View other 1 match with an identical amplicon
Primers and probe alignment: |
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
23 bp |
0 |
0 |
1 |
23 |
2.38e-10 |
primerB |
100.0 |
22 bp |
0 |
0 |
192 |
171 |
8.07e-10 |
probe |
100.0 |
25 bp |
0 |
0 |
169 |
145 |
2.06e-11 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.