Match details
Record ID: |
MP397718.1 |
Database: |
emblrelpat |
Go to original record |
Description: |
Sequence 55 from Patent EP3571925. |
Taxon: |
synthetic construct |
Original size: |
15245 bp |
Patents: |
EP3571925 (lens, espacenet)
|
View other 9 matches for this record
View other 1572 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
14487 |
14655 |
- |
169 bp |
|
1 ttcccctcgg tatccaatta gagtctcata ttcactctca atccatacaa
51 aaacacatcc aaaatcacag aaaatgggag cttggattga acaagatgga
101 ttgcacgcag gttctccggc cgcttgggtg gagaggctat tcggctatga
151 ctgggcacaa cagacaatc
View other 13 matches with an identical amplicon
Primers and probe alignment: |
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
23 bp |
0 |
0 |
1 |
23 |
2.09e-10 |
primerB |
100.0 |
22 bp |
0 |
0 |
169 |
148 |
7.07e-10 |
probe |
100.0 |
25 bp |
0 |
0 |
146 |
122 |
1.80e-11 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.