Match details
Record ID: |
MC412673.1 |
Database: |
emblrelpat |
Go to original record |
Description: |
JP 2018183170-A/224: METHODS AND COMPOSITIONS FOR INTEGRATION OF AN EXOGENOUS SEQUENCE WITHIN THE GENOME OF PLANTS. |
Taxon: |
synthetic construct |
Original size: |
3336 bp |
Patents: |
JP2018183170 (lens, espacenet)
|
View other 4 matches for this record
View other 1579 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
2360 |
2427 |
+ |
68 bp |
|
1 ttgagggtgt tgtggctggt attgcttacg ctgggccctg gaaggctagg
51 aacgcttacg attggaca
View other 1562 matches with an identical amplicon
Primers and probe alignment: |
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
21 bp |
0 |
0 |
1 |
21 |
9.83e-10 |
primerB |
100.0 |
21 bp |
0 |
0 |
68 |
48 |
9.83e-10 |
probe |
100.0 |
22 bp |
0 |
0 |
44 |
23 |
2.90e-10 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.