Match details
Record ID:
LY667603.1
Database:
emblrelpat
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Description:
KR 1020190003994-A/5: NUCLEIC ACID SEQUENCE FOR DETECTING EXISTENCE OF TRANSGENIC SOYBEAN EVENT DBN9004 IN BIOLOGICAL SAMPLE, KIT CONTAINING SAME AND DETECTION METHOD THEREFOR.
Taxon:
synthetic construct
Original size:
7059 bp
Patents:
KR1020190003994 (lens , espacenet )
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Predicted amplification details:
Mismatches
Gaps
From
To
Strand
Amplicon size
0
0
2173
2251
-
79 bp
1 cgtcttcaaa gcaagtggat tgatgtgata tctccactga cgtaagggat
51 gacgcacaat cccactatcc ttcgcaaga
View other 6569 matches with an identical amplicon
Primers and probe alignment:
Primer/Probe
% Identity
Length
Mismatches
Gaps
From
To
Score
primerA
100.0
22 bp
0
0
1
22
3.41e-10
primerB
100.0
22 bp
0
0
79
58
3.41e-10
probe
100.0
26 bp
0
0
31
56
2.52e-12
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.