Match details
Record ID:
LX250377.1
Database:
emblrelpat
Go to original record
Description:
WO 2017090761-A/6: Method of modifying genomic sequence of monocots comprising specifically converting nucleobase in targeted DNA sequence, and molecular complex used therefor.
Taxon:
synthetic construct
Original size:
14551 bp
Patents:
WO2017090761 (lens , espacenet )
View other 15 matches for this record
View other 1054 matches for this method
Predicted amplification details:
Mismatches
Gaps
From
To
Strand
Amplicon size
0
0
8341
8427
+
87 bp
1 tttttattcg gttttcgcta tcgaactgtg aaatggaaat ggatggagaa
51 gagttaatga atgatatggt ccttttgttc attctca
View other 1026 matches with an identical amplicon
Primers and probe alignment:
Primer/Probe
% Identity
Length
Mismatches
Gaps
From
To
Score
primerA
100.0
23 bp
0
0
1
23
1.11e-10
primerB
100.0
26 bp
0
0
87
62
2.79e-12
probe
100.0
36 bp
0
0
60
25
1.09e-17
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.