Match details
Record ID: |
LG167270.1 |
Database: |
emblrelpat |
Go to original record |
Description: |
KR 1020150140723-A/296: METHODS AND COMPOSITIONS FOR INTEGRATION OF AN EXOGENOUS SEQUENCE WITHIN THE GENOME OF PLANTS. |
Taxon: |
synthetic construct |
Original size: |
3893 bp |
Patents: |
KR1020150140723 (lens, espacenet)
|
View other 1 match for this record
Method: |
QL-CON-00-005 |
Go to GMOMETHODS record |
|
View in JRC GMO-Matrix
|
Description: | Qualitative PCR method for detection of the junction between the pat gene and the CaMV35S terminator (ISO/FDIS 21569:2005). |
Target: | pat-CaMV T-35S |
View other 212 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
3560 |
3767 |
- |
208 bp |
|
1 atggtggatg gcatgatgtt ggtttttggc aaagggattt tgagttgcca
51 gctcctccaa ggccagttag gccagttacc cagatctaat agagtccgca
101 aaaatcacca gtctctctct acaaatctat ctctctctat ttttctccag
151 aataatgtgt gagtagttcc cagataaggg aattagggtt cttatagggt
201 ttcgctca
View other 35 matches with an identical amplicon
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
21 bp |
0 |
0 |
1 |
21 |
2.95e-09 |
primerB |
100.0 |
23 bp |
0 |
0 |
208 |
186 |
2.59e-10 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.