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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Match details

Record ID: LG144393.1
Database: emblrelpat Go to original record
Description: KR 1020160032990-A/3: Method for improving fast growth or biomass increase of plant using CBR1 in plants.
Taxon: synthetic construct
Original size: 2692 bp
Patents: KR1020160032990 (lens, espacenet)

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Method: QL-ELE-00-006 Go to GMOMETHODS record
View in JRC GMO-Matrix
Description:Qualitative PCR method for detection of nopaline synthase terminator (L 00.00-31, 1998).
Target:T-nos

View other 15527 matches for this method

Predicted amplification details:
Mismatches Gaps From To Strand Amplicon size
0 0 2447 2624 + 178 bp
Amplicon: 178 bp 
1     gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51    acgttaagca tgtaataatt aacatgtatg catgacgtta ttatgagatg
101   ggtttttatg attagagtcc cgcaattata catttaatac gcgatagaaa
151   acaaaatata gcgcgcaaac taggataa

View other 1 match with an identical amplicon

Primers alignment:
Primer/Probe % Identity Length Mismatches Gaps From To Score
primerA 100.0 20 bp 0 0 1 20 8.44e-09
primerB 100.0 20 bp 0 0 178 159 8.44e-09

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.