Match details
| Record ID: | LG087090.1 | |
|---|---|---|
| Database: | emblrelpat | Go to original record |
| Description: | KR 1020150093721-A/46: PLANT SELF NITROGEN FIXATION BY MIMICKING PROKARYOTIC PATHWAYS. | |
| Taxon: | synthetic construct | |
| Original size: | 16890 bp | |
| Patents: | KR1020150093721 (lens, espacenet) | |
View other 36 matches for this record
| Method: | QL-ELE-00-004 | Go to GMOMETHODS record |
|---|---|---|
| View in JRC GMO-Matrix | ||
| Description: | Qualitative PCR method for detection of Cauliflower Mosaic Virus 35S promoter (Lipp et al.,2001). | |
| Target: | CaMV P-35S | |
View other 10536 matches for this method
Predicted amplification details:
| Mismatches | Gaps | From | To | Strand | Amplicon size |
|---|---|---|---|---|---|
| 0 | 0 | 6775 | 6897 | + | 123 bp |
| Amplicon: | 123 bp |
|---|
1 ccacgtcttc aaagcaagtg gattgatgtg atatctccac tgacgtaagg 51 gatgacgcac aatcccacta tccttcgcaa gacccttcct ctatataagg 101 aagttcattt catttggaga gga
View other 3472 matches with an identical amplicon
Primers alignment:
| Primer/Probe | % Identity | Length | Mismatches | Gaps | From | To | Score |
|---|---|---|---|---|---|---|---|
| primerA | 100.0 | 21 bp | 0 | 0 | 1 | 21 | 1.84e-09 |
| primerB | 100.0 | 25 bp | 0 | 0 | 123 | 99 | 1.30e-11 |
Related publications:
- Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
- Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.