Match details
Record ID: |
JB151260.1 |
Database: |
emblrelpat |
Go to original record |
Description: |
Sequence 4 from Patent EP2521439. |
Taxon: |
synthetic construct |
Original size: |
267 bp |
Patents: |
EP2521439 (lens, espacenet)
|
View other 631 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
2 |
0 |
119 |
196 |
+ |
78 bp |
|
1 caaaataacg tggaaaagag ctgtcctgac agcccactca ctaatgcgta
51 tgacgaacgc agtgacgacc acaaaact
View other 161 matches with an identical amplicon
Primers and probe alignment: |
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
22 bp |
0 |
0 |
1 |
22 |
3.36e-10 |
primerB |
100.0 |
18 bp |
0 |
0 |
76 |
59 |
4.97e-08 |
probe |
100.0 |
22 bp |
0 |
0 |
26 |
47 |
3.36e-10 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.