Match details

Record ID: BD170162.1
Database: emblrelpat Go to original record
Description: WO 2002034943-A/75: Method of quantifying gene modification and standard molecule to be used therein.
Taxon: synthetic construct
Original size: 239 bp
Patents: WO2002034943 (lens, espacenet)

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Method: QL-TAX-GM-001 Go to GMOMETHODS record
Description:Qualitative PCR method for detection of soybean lectin gene (Barbau-Piednoir et al., 2014).
Target:soybean lectin

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Predicted amplification details:
Mismatches Gaps From To Strand Amplicon size
1 0 121 201 - 81 bp

Amplicon: 81 bp
1     aaccggtagc gttgccagct tcgccgcttc cttcaacttc accttctatg
51    cccctgacac aaaaaggctt gcagatgggc g 

View other 9 matches with an identical amplicon


Primers alignment:
Primer/Probe % Identity Length Mismatches Gaps From To Score
primerA 100.0 18 bp 0 0 1 18 4.48e-08
primerB 100.0 18 bp 0 0 80 63 4.83e-08


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.