Match details
| Record ID: |
GZ655672.1 |
| Database: |
emblrelpat |
Go to original record |
| Description: |
Sequence 17948 from patent US 8344211. |
| Taxon: |
unidentified |
| Original size: |
709 bp |
| Patents: |
US8344211 (lens, espacenet)
|
| Method: |
QT-TAX-ZM-004 |
Go to GMOMETHODS record |
| Description: | Quantitative PCR method for detection of maize aldolase 1 gene. |
| Target: | maize aldolase 1 |
View other 211 matches for this method
| Predicted amplification details: |
| Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
| 0 |
0 |
433 |
503 |
- |
71 bp |
|
1 agggaggacg cctccctccc ctgaggacat caacaaaaag gcttgccatc
51 cttggtcttc tggtacaggg t
| Primers and probe alignment: |
| Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
| primerA |
100.0 |
17 bp |
0 |
0 |
1 |
17 |
1.42e-07 |
| primerB |
100.0 |
22 bp |
0 |
0 |
71 |
50 |
3.04e-10 |
| probe |
96.3 |
27 bp |
0 |
1 |
22 |
48 |
1.04e-10 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.
