Match details
| Record ID: |
GZ585327.1 |
| Database: |
emblrelpat |
Go to original record |
| Description: |
Sequence 7251 from patent US 8299321. |
| Taxon: |
unidentified |
| Original size: |
410 bp |
| Patents: |
US8299321 (lens, espacenet)
|
View other 7 matches for this record
| Method: |
QT-TAX-GM-007 |
Go to GMOMETHODS record |
| Description: | Quantitative PCR method for detection of soybean lectin gene |
| Target: | soybean lectin |
View other 38 matches for this method
| Predicted amplification details: |
| Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
| 2 |
0 |
255 |
373 |
+ |
119 bp |
|
1 gccctctact ccacccccat ccacatttgg gacaaagaaa ccggtagcgt
51 tgccagcttc gccgcttcct tcaacttcan cttctaagcc cctgacacaa
101 aaanggcttg caaatgggc
View other 1 match with an identical amplicon
| Primers and probe alignment: |
| Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
| primerA |
100.0 |
19 bp |
0 |
0 |
1 |
19 |
2.01e-08 |
| primerB |
90.5 |
21 bp |
1 |
1 |
119 |
99 |
1.30e-05 |
| probe |
100.0 |
25 bp |
0 |
0 |
55 |
79 |
1.32e-11 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.
