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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_JA078185 nrnl1 Sequence 9 from Patent WO2011034946. 18329 bp unidentified QT-ELE-00-004 82 bp View
NRN_JA180320 nrnl1 Sequence 20 from Patent EP2294199. 10623 bp unidentified QT-ELE-00-004 82 bp View
NRN_JA180320 nrnl1 Sequence 20 from Patent EP2294199. 10623 bp unidentified QT-ELE-00-004 82 bp View
NRN_JA180320 nrnl1 Sequence 20 from Patent EP2294199. 10623 bp unidentified QT-ELE-00-004 82 bp View
NRN_JA180321 nrnl1 Sequence 21 from Patent EP2294199. 11002 bp unidentified QT-ELE-00-004 82 bp View
NRN_JA180321 nrnl1 Sequence 21 from Patent EP2294199. 11002 bp unidentified QT-ELE-00-004 82 bp View
NRN_JA216561 nrnl1 Sequence 38 from Patent EP2309843. ... 15162 bp unidentified QT-ELE-00-004 82 bp View
NRN_JA216566 nrnl1 Sequence 43 from Patent EP2309843. 15301 bp unidentified QT-ELE-00-004 82 bp View
NRN_JA216568 nrnl1 Sequence 45 from Patent EP2309843. 15544 bp unidentified QT-ELE-00-004 82 bp View
NRN_JA216603 nrnl1 Sequence 80 from Patent EP2309843. 9651 bp unidentified QT-ELE-00-004 82 bp View
NRN_JA216604 nrnl1 Sequence 81 from Patent EP2309843. 21593 bp unidentified QT-ELE-00-004 82 bp View
NRN_JA216605 nrnl1 Sequence 82 from Patent EP2309843. 15097 bp unidentified QT-ELE-00-004 82 bp View
NRN_JA279471 nrnl1 Sequence 6 from Patent WO2011008510... 6747 bp unidentified QT-ELE-00-004 82 bp View
NRN_JA279472 nrnl1 Sequence 7 from Patent WO2011008510. 8462 bp unidentified QT-ELE-00-004 82 bp View
NRN_JA279474 nrnl1 Sequence 9 from Patent WO2011008510. 16490 bp unidentified QT-ELE-00-004 82 bp View
NRN_JA279479 nrnl1 Sequence 14 from Patent WO2011008510. 15510 bp unidentified QT-ELE-00-004 82 bp View
NRN_JA279480 nrnl1 Sequence 15 from Patent WO2011008510. 17273 bp unidentified QT-ELE-00-004 82 bp View
NRN_JA279488 nrnl1 Sequence 23 from Patent WO2011008510. 9245 bp unidentified QT-ELE-00-004 82 bp View
NRN_JA279492 nrnl1 Sequence 27 from Patent WO2011008510. 15156 bp unidentified QT-ELE-00-004 82 bp View
NRN_JA279493 nrnl1 Sequence 28 from Patent WO2011008510. 16010 bp unidentified QT-ELE-00-004 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.