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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_HI968062 nrnl1 Sequence 13 from Patent WO2010138011. 8906 bp unidentified QT-ELE-00-004 82 bp View
NRN_HI980482 nrnl1 Sequence 1 from Patent WO2010142424. 11585 bp unidentified QT-ELE-00-004 82 bp View
NRN_HV196389 nrnl1 JP 2000513217-A/35: Gene expression... 1034 bp unidentified QT-ELE-00-004 82 bp View
NRN_HV549848 nrnl1 JP 2011527180-A/64: Influenza Virus... 2065 bp unidentified QT-ELE-00-004 82 bp View
NRN_HV549864 nrnl1 JP 2011527180-A/80: Influenza Virus... 3079 bp unidentified QT-ELE-00-004 82 bp View
NRN_HV549867 nrnl1 JP 2011527180-A/83: Influenza Virus... 3067 bp unidentified QT-ELE-00-004 82 bp View
NRN_HV549868 nrnl1 JP 2011527180-A/84: Influenza Virus... 3091 bp unidentified QT-ELE-00-004 82 bp View
NRN_HV549871 nrnl1 JP 2011527180-A/87: Influenza Virus... 3058 bp unidentified QT-ELE-00-004 82 bp View
NRN_HV549872 nrnl1 JP 2011527180-A/88: Influenza Virus... 3079 bp unidentified QT-ELE-00-004 82 bp View
NRN_HV549875 nrnl1 JP 2011527180-A/91: Influenza Virus... 3061 bp unidentified QT-ELE-00-004 82 bp View
NRN_HV549876 nrnl1 JP 2011527180-A/92: Influenza Virus... 3085 bp unidentified QT-ELE-00-004 82 bp View
NRN_HV549879 nrnl1 JP 2011527180-A/95: Influenza Virus... 3115 bp unidentified QT-ELE-00-004 82 bp View
NRN_HV549880 nrnl1 JP 2011527180-A/96: Influenza Virus... 3142 bp unidentified QT-ELE-00-004 82 bp View
NRN_HV549894 nrnl1 JP 2011527180-A/110: Influenza Viru... 3462 bp unidentified QT-ELE-00-004 82 bp View
NRN_HV549894 nrnl1 JP 2011527180-A/110: Influenza Viru... 3462 bp unidentified QT-ELE-00-004 82 bp View
NRN_HV549895 nrnl1 JP 2011527180-A/111: Influenza Viru... 747 bp unidentified QT-ELE-00-004 82 bp View
NRN_HV549895 nrnl1 JP 2011527180-A/111: Influenza Viru... 747 bp unidentified QT-ELE-00-004 82 bp View
NRN_HV549900 nrnl1 JP 2011527180-A/116: Influenza Viru... 3505 bp unidentified QT-ELE-00-004 82 bp View
NRN_HV549900 nrnl1 JP 2011527180-A/116: Influenza Viru... 3505 bp unidentified QT-ELE-00-004 82 bp View
NRN_HV549912 nrnl1 JP 2011527180-A/128: Influenza Viru... 3520 bp unidentified QT-ELE-00-004 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.