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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_HI508543 nrnl1 Sequence 40 from Patent EP2142009. 1894 bp unidentified QT-ELE-00-004 82 bp View
NRN_HI508543 nrnl1 Sequence 40 from Patent EP2142009. 1894 bp unidentified QT-ELE-00-004 82 bp View
NRN_HI508545 nrnl1 Sequence 42 from Patent EP2142009. ... 2101 bp unidentified QT-ELE-00-004 82 bp View
NRN_HI508545 nrnl1 Sequence 42 from Patent EP2142009. ... 2101 bp unidentified QT-ELE-00-004 82 bp View
NRN_HI508546 nrnl1 Sequence 43 from Patent EP2142009. ... 1873 bp unidentified QT-ELE-00-004 82 bp View
NRN_HI508546 nrnl1 Sequence 43 from Patent EP2142009. ... 1873 bp unidentified QT-ELE-00-004 82 bp View
NRN_HI574809 nrnl1 Sequence 19 from Patent EP2219434. 12159 bp unidentified QT-ELE-00-004 82 bp View
NRN_HI574809 nrnl1 Sequence 19 from Patent EP2219434. 12159 bp unidentified QT-ELE-00-004 82 bp View
NRN_HI574809 nrnl1 Sequence 19 from Patent EP2219434. 12159 bp unidentified QT-ELE-00-004 82 bp View
NRN_HI578390 nrnl1 Sequence 6 from Patent WO2010114989. 11251 bp unidentified QT-ELE-00-004 82 bp View
NRN_HI578391 nrnl1 Sequence 7 from Patent WO2010114989. 9060 bp unidentified QT-ELE-00-004 82 bp View
NRN_HI578394 nrnl1 Sequence 10 from Patent WO2010114989. 11299 bp unidentified QT-ELE-00-004 82 bp View
NRN_HI578395 nrnl1 Sequence 11 from Patent WO2010114989. 9142 bp unidentified QT-ELE-00-004 82 bp View
NRN_HI578398 nrnl1 Sequence 14 from Patent WO2010114989. 11304 bp unidentified QT-ELE-00-004 82 bp View
NRN_HI578399 nrnl1 Sequence 15 from Patent WO2010114989. 9147 bp unidentified QT-ELE-00-004 82 bp View
NRN_HI578402 nrnl1 Sequence 18 from Patent WO2010114989. 4330 bp unidentified QT-ELE-00-004 82 bp View
NRN_HI578403 nrnl1 Sequence 19 from Patent WO2010114989. 5195 bp unidentified QT-ELE-00-004 82 bp View
NRN_HI578404 nrnl1 Sequence 20 from Patent WO2010114989. 8314 bp unidentified QT-ELE-00-004 82 bp View
NRN_HI578409 nrnl1 Sequence 25 from Patent WO2010114989. 11736 bp unidentified QT-ELE-00-004 82 bp View
NRN_HI578410 nrnl1 Sequence 26 from Patent WO2010114989. 12929 bp unidentified QT-ELE-00-004 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.