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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_HI284312 nrnl1 Sequence 169 from Patent EP2046111. 4856 bp unidentified QT-ELE-00-004 82 bp View
NRN_HI284312 nrnl1 Sequence 169 from Patent EP2046111. 4856 bp unidentified QT-ELE-00-004 82 bp View
NRN_HI284313 nrnl1 Sequence 170 from Patent EP2046111. 1394 bp unidentified QT-ELE-00-004 82 bp View
NRN_HI284313 nrnl1 Sequence 170 from Patent EP2046111. 1394 bp unidentified QT-ELE-00-004 82 bp View
NRN_HI423696 nrnl1 Sequence 5 from Patent EP2118274. 11578 bp unidentified QT-ELE-00-004 82 bp View
NRN_HI423696 nrnl1 Sequence 5 from Patent EP2118274. 11578 bp unidentified QT-ELE-00-004 82 bp View
NRN_HI423704 nrnl1 Sequence 13 from Patent EP2118274. 10606 bp unidentified QT-ELE-00-004 82 bp View
NRN_HI423704 nrnl1 Sequence 13 from Patent EP2118274. 10606 bp unidentified QT-ELE-00-004 82 bp View
NRN_HI423705 nrnl1 Sequence 14 from Patent EP2118274. 11473 bp unidentified QT-ELE-00-004 82 bp View
NRN_HI423705 nrnl1 Sequence 14 from Patent EP2118274. 11473 bp unidentified QT-ELE-00-004 82 bp View
NRN_HI471080 nrnl1 Sequence 11 from Patent EP2137312. ... 10786 bp unidentified QT-ELE-00-004 82 bp View
NRN_HI471081 nrnl1 Sequence 12 from Patent EP2137312. ... 10468 bp unidentified QT-ELE-00-004 82 bp View
NRN_HI471082 nrnl1 Sequence 13 from Patent EP2137312. ... 11000 bp unidentified QT-ELE-00-004 82 bp View
NRN_HI471083 nrnl1 Sequence 14 from Patent EP2137312. ... 10682 bp unidentified QT-ELE-00-004 82 bp View
NRN_HI508523 nrnl1 Sequence 20 from Patent EP2142009. 1924 bp unidentified QT-ELE-00-004 82 bp View
NRN_HI508523 nrnl1 Sequence 20 from Patent EP2142009. 1924 bp unidentified QT-ELE-00-004 82 bp View
NRN_HI508525 nrnl1 Sequence 22 from Patent EP2142009. 2152 bp unidentified QT-ELE-00-004 82 bp View
NRN_HI508525 nrnl1 Sequence 22 from Patent EP2142009. 2152 bp unidentified QT-ELE-00-004 82 bp View
NRN_HI508526 nrnl1 Sequence 23 from Patent EP2142009. 2122 bp unidentified QT-ELE-00-004 82 bp View
NRN_HI508526 nrnl1 Sequence 23 from Patent EP2142009. 2122 bp unidentified QT-ELE-00-004 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.