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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_GM979630 nrnl1 Sequence 34 from Patent WO200814793... 20082 bp unidentified QT-ELE-00-004 82 bp View
NRN_GM979642 nrnl1 Sequence 46 from Patent WO200814793... 5267 bp unidentified QT-ELE-00-004 82 bp View
NRN_GM979643 nrnl1 Sequence 47 from Patent WO200814793... 8643 bp unidentified QT-ELE-00-004 82 bp View
NRN_GM979644 nrnl1 Sequence 48 from Patent WO200814793... 8720 bp unidentified QT-ELE-00-004 82 bp View
NRN_GM979647 nrnl1 Sequence 51 from Patent WO200814793... 10058 bp unidentified QT-ELE-00-004 82 bp View
NRN_GM979648 nrnl1 Sequence 52 from Patent WO200814793... 11611 bp unidentified QT-ELE-00-004 82 bp View
NRN_GM979652 nrnl1 Sequence 56 from Patent WO200814793... 7466 bp unidentified QT-ELE-00-004 82 bp View
NRN_GM979653 nrnl1 Sequence 57 from Patent WO200814793... 7841 bp unidentified QT-ELE-00-004 82 bp View
NRN_GM979655 nrnl1 Sequence 59 from Patent WO200814793... 9223 bp unidentified QT-ELE-00-004 82 bp View
NRN_GM979656 nrnl1 Sequence 60 from Patent WO200814793... 7472 bp unidentified QT-ELE-00-004 82 bp View
NRN_GM979657 nrnl1 Sequence 61 from Patent WO200814793... 7847 bp unidentified QT-ELE-00-004 82 bp View
NRN_GM979658 nrnl1 Sequence 62 from Patent WO200814793... 10866 bp unidentified QT-ELE-00-004 82 bp View
NRN_GM979659 nrnl1 Sequence 63 from Patent WO200814793... 12055 bp unidentified QT-ELE-00-004 82 bp View
NRN_GM979664 nrnl1 Sequence 68 from Patent WO200814793... 8638 bp unidentified QT-ELE-00-004 82 bp View
NRN_GM979671 nrnl1 Sequence 75 from Patent WO200814793... 11693 bp unidentified QT-ELE-00-004 82 bp View
NRN_GM979694 nrnl1 Sequence 98 from Patent WO200814793... 8641 bp unidentified QT-ELE-00-004 82 bp View
NRN_GM979695 nrnl1 Sequence 99 from Patent WO200814793... 8641 bp unidentified QT-ELE-00-004 82 bp View
NRN_GM979696 nrnl1 Sequence 100 from Patent WO20081479... 8641 bp unidentified QT-ELE-00-004 82 bp View
NRN_GM979697 nrnl1 Sequence 101 from Patent WO20081479... 11647 bp unidentified QT-ELE-00-004 82 bp View
NRN_GM979698 nrnl1 Sequence 102 from Patent WO20081479... 11611 bp unidentified QT-ELE-00-004 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.