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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_FB729847 nrnl1 Sequence 16 from Patent WO200702486... 438 bp unidentified QT-ELE-00-004 82 bp View
NRN_FB729848 nrnl1 Sequence 17 from Patent WO200702486... 1344 bp unidentified QT-ELE-00-004 82 bp View
NRN_FB729848 nrnl1 Sequence 17 from Patent WO200702486... 1344 bp unidentified QT-ELE-00-004 82 bp View
NRN_FB729848 nrnl1 Sequence 17 from Patent WO200702486... 1344 bp unidentified QT-ELE-00-004 82 bp View
NRN_FB729849 nrnl1 Sequence 18 from Patent WO200702486... 1344 bp unidentified QT-ELE-00-004 82 bp View
NRN_FB729849 nrnl1 Sequence 18 from Patent WO200702486... 1344 bp unidentified QT-ELE-00-004 82 bp View
NRN_FB729849 nrnl1 Sequence 18 from Patent WO200702486... 1344 bp unidentified QT-ELE-00-004 82 bp View
NRN_FB741979 nrnl1 Sequence 1 from Patent WO2007024782... 534 bp unidentified QT-ELE-00-004 82 bp View
NRN_FB741980 nrnl1 Sequence 2 from Patent WO2007024782... 7565 bp unidentified QT-ELE-00-004 82 bp View
NRN_FB741980 nrnl1 Sequence 2 from Patent WO2007024782... 7565 bp unidentified QT-ELE-00-004 82 bp View
NRN_FB741980 nrnl1 Sequence 2 from Patent WO2007024782... 7565 bp unidentified QT-ELE-00-004 82 bp View
NRN_FB742932 nrnl1 Sequence 23 from Patent WO2008013450. 14256 bp unidentified QT-ELE-00-004 82 bp View
NRN_FB742932 nrnl1 Sequence 23 from Patent WO2008013450. 14256 bp unidentified QT-ELE-00-004 82 bp View
NRN_FB753779 nrnl1 Sequence 20 from Patent WO2008023263. 340 bp unidentified QT-ELE-00-004 82 bp View
NRN_FV529721 nrnl1 A novel selection marker and use th... 1026 bp unidentified QT-ELE-00-004 82 bp View
NRN_FV532179 nrnl1 CORN PLANT AND SEED CORRESPONDING T... 12208 bp unidentified QT-ELE-00-004 82 bp View
NRN_FV533057 nrnl1 TRANSGENIC CROP PLANTS WITH IMPROVE... 613 bp unidentified QT-ELE-00-004 82 bp View
NRN_FV533057 nrnl1 TRANSGENIC CROP PLANTS WITH IMPROVE... 613 bp unidentified QT-ELE-00-004 82 bp View
NRN_FW335849 nrnl1 gene modification of OASA2 gene via... 19406 bp unidentified QT-ELE-00-004 82 bp View
NRN_FW335849 nrnl1 gene modification of OASA2 gene via... 19406 bp unidentified QT-ELE-00-004 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.