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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_EA756620 nrnl1 Sequence 29 from patent US 7371848.... 1971 bp unidentified QT-ELE-00-004 82 bp View
NRN_FB505735 nrnl1 Sequence 21 from Patent WO200809579... 504 bp unidentified QT-ELE-00-004 82 bp View
NRN_FB513365 nrnl1 Sequence 11 from Patent EP1862552. ... 332 bp unidentified QT-ELE-00-004 82 bp View
NRN_FB513366 nrnl1 Sequence 12 from Patent EP1862552. ... 499 bp unidentified QT-ELE-00-004 82 bp View
NRN_FB513368 nrnl1 Sequence 14 from Patent EP1862552. ... 1600 bp unidentified QT-ELE-00-004 82 bp View
NRN_FB675931 nrnl1 Sequence 1 from Patent WO2007122086... 9810 bp unidentified QT-ELE-00-004 82 bp View
NRN_FB677121 nrnl1 Sequence 57 from Patent EP1881074. ... 5365 bp unidentified QT-ELE-00-004 82 bp View
NRN_FB700509 nrnl1 Sequence 5 from Patent WO2007107853. 8860 bp unidentified QT-ELE-00-004 82 bp View
NRN_FB700509 nrnl1 Sequence 5 from Patent WO2007107853. 8860 bp unidentified QT-ELE-00-004 82 bp View
NRN_FB702577 nrnl1 Sequence 6 from Patent EP1882742. ... 11465 bp unidentified QT-ELE-00-004 82 bp View
NRN_FB706318 nrnl1 Sequence 25 from Patent WO200712738... 8898 bp unidentified QT-ELE-00-004 82 bp View
NRN_FB706319 nrnl1 Sequence 26 from Patent WO200712738... 7887 bp unidentified QT-ELE-00-004 82 bp View
NRN_FB706320 nrnl1 Sequence 27 from Patent WO200712738... 11482 bp unidentified QT-ELE-00-004 82 bp View
NRN_FB706568 nrnl1 Sequence 7 from Patent WO2007125264... 16177 bp unidentified QT-ELE-00-004 82 bp View
NRN_FB707511 nrnl1 Sequence 7 from Patent WO2007027777... 4990 bp unidentified QT-ELE-00-004 82 bp View
NRN_FB707511 nrnl1 Sequence 7 from Patent WO2007027777... 4990 bp unidentified QT-ELE-00-004 82 bp View
NRN_FB707952 nrnl1 Sequence 37 from Patent WO200713169... 958 bp unidentified QT-ELE-00-004 82 bp View
NRN_FB727425 nrnl1 Sequence 3 from Patent WO2008002872... 5362 bp unidentified QT-ELE-00-004 82 bp View
NRN_FB727428 nrnl1 Sequence 6 from Patent WO2008002872... 10849 bp unidentified QT-ELE-00-004 82 bp View
NRN_FB727436 nrnl1 Sequence 14 from Patent WO200800287... 8679 bp unidentified QT-ELE-00-004 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.