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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1578 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
MP704734.1 emblrelpat Sequence 61 from Patent EP3677669. 36590 bp synthetic construct QT-ELE-00-002 68 bp View
MP704735.1 emblrelpat Sequence 62 from Patent EP3677669. 35499 bp synthetic construct QT-ELE-00-002 68 bp View
MP704736.1 emblrelpat Sequence 63 from Patent EP3677669. 22042 bp synthetic construct QT-ELE-00-002 68 bp View
MP704737.1 emblrelpat Sequence 64 from Patent EP3677669. 23255 bp synthetic construct QT-ELE-00-002 68 bp View
MP755542.1 emblrelpat Sequence 12 from Patent EP3703488. 4584 bp synthetic construct QT-ELE-00-002 68 bp View
MP760358.1 emblrelpat Sequence 12 from Patent EP3709792. 4584 bp synthetic construct QT-ELE-00-002 68 bp View
MP782882.1 emblrelpat Sequence 9 from Patent EP3717650. 14008 bp synthetic construct QT-ELE-00-002 68 bp View
MP782883.1 emblrelpat Sequence 10 from Patent EP3717650. 16068 bp synthetic construct QT-ELE-00-002 68 bp View
MS901023.1 emblrelpat Sequence 33 from Patent EP3156489. 11205 bp synthetic construct QT-ELE-00-002 68 bp View
MS901023.1 emblrelpat Sequence 33 from Patent EP3156489. 11205 bp synthetic construct QT-ELE-00-002 68 bp View
MS901026.1 emblrelpat Sequence 36 from Patent EP3156489. 11205 bp synthetic construct QT-ELE-00-002 68 bp View
MS901026.1 emblrelpat Sequence 36 from Patent EP3156489. 11205 bp synthetic construct QT-ELE-00-002 68 bp View
MS934374.1 emblrelpat Sequence 9 from Patent EP3119186. 6762 bp synthetic construct QT-ELE-00-002 68 bp View
MS934375.1 emblrelpat Sequence 10 from Patent EP3119186. 9259 bp synthetic construct QT-ELE-00-002 68 bp View
MS939835.1 emblrelpat Sequence 16 from Patent EP3116998. 8610 bp synthetic construct QT-ELE-00-002 68 bp View
MV120455.1 emblrelpat Sequence 6 from patent US 10633669. 552 bp unidentified QT-ELE-00-002 68 bp View
MV152410.1 emblrelpat Sequence 6 from patent US 10655140. 552 bp unidentified QT-ELE-00-002 68 bp View
MV315533.1 emblrelpat Sequence 35 from patent US 10669554. 33034 bp unidentified QT-ELE-00-002 68 bp View
MV315534.1 emblrelpat Sequence 36 from patent US 10669554. 33003 bp unidentified QT-ELE-00-002 68 bp View
MV315535.1 emblrelpat Sequence 37 from patent US 10669554. 33951 bp unidentified QT-ELE-00-002 68 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.