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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1578 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
MP704714.1 emblrelpat Sequence 41 from Patent EP3677669. 34404 bp synthetic construct QT-ELE-00-002 68 bp View
MP704715.1 emblrelpat Sequence 42 from Patent EP3677669. 38762 bp synthetic construct QT-ELE-00-002 68 bp View
MP704716.1 emblrelpat Sequence 43 from Patent EP3677669. 35836 bp synthetic construct QT-ELE-00-002 68 bp View
MP704717.1 emblrelpat Sequence 44 from Patent EP3677669. 47165 bp synthetic construct QT-ELE-00-002 68 bp View
MP704718.1 emblrelpat Sequence 45 from Patent EP3677669. 46978 bp synthetic construct QT-ELE-00-002 68 bp View
MP704719.1 emblrelpat Sequence 46 from Patent EP3677669. 41726 bp synthetic construct QT-ELE-00-002 68 bp View
MP704720.1 emblrelpat Sequence 47 from Patent EP3677669. 36797 bp synthetic construct QT-ELE-00-002 68 bp View
MP704721.1 emblrelpat Sequence 48 from Patent EP3677669. 42674 bp synthetic construct QT-ELE-00-002 68 bp View
MP704722.1 emblrelpat Sequence 49 from Patent EP3677669. 40406 bp synthetic construct QT-ELE-00-002 68 bp View
MP704723.1 emblrelpat Sequence 50 from Patent EP3677669. 39630 bp synthetic construct QT-ELE-00-002 68 bp View
MP704724.1 emblrelpat Sequence 51 from Patent EP3677669. 36936 bp synthetic construct QT-ELE-00-002 68 bp View
MP704725.1 emblrelpat Sequence 52 from Patent EP3677669. 36767 bp synthetic construct QT-ELE-00-002 68 bp View
MP704726.1 emblrelpat Sequence 53 from Patent EP3677669. 35494 bp synthetic construct QT-ELE-00-002 68 bp View
MP704727.1 emblrelpat Sequence 54 from Patent EP3677669. 37935 bp synthetic construct QT-ELE-00-002 68 bp View
MP704728.1 emblrelpat Sequence 55 from Patent EP3677669. 38239 bp synthetic construct QT-ELE-00-002 68 bp View
MP704729.1 emblrelpat Sequence 56 from Patent EP3677669. 34850 bp synthetic construct QT-ELE-00-002 68 bp View
MP704730.1 emblrelpat Sequence 57 from Patent EP3677669. 35154 bp synthetic construct QT-ELE-00-002 68 bp View
MP704731.1 emblrelpat Sequence 58 from Patent EP3677669. 38074 bp synthetic construct QT-ELE-00-002 68 bp View
MP704732.1 emblrelpat Sequence 59 from Patent EP3677669. 36718 bp synthetic construct QT-ELE-00-002 68 bp View
MP704733.1 emblrelpat Sequence 60 from Patent EP3677669. 36517 bp synthetic construct QT-ELE-00-002 68 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.