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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1578 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
MO451782.1 emblrelpat Sequence 3 from patent US 10455834. 12381 bp unidentified QT-ELE-00-002 68 bp View
MO451793.1 emblrelpat Sequence 14 from patent US 10455834. 15170 bp unidentified QT-ELE-00-002 68 bp View
MO567610.1 emblrelpat Sequence 88 from patent US 10501748. 6661 bp unidentified QT-ELE-00-002 68 bp View
MO567729.1 emblrelpat Sequence 289 from patent US 10501748. 6661 bp unidentified QT-ELE-00-002 68 bp View
MO567743.1 emblrelpat Sequence 303 from patent US 10501748. 11938 bp unidentified QT-ELE-00-002 68 bp View
MO567754.1 emblrelpat Sequence 314 from patent US 10501748. 3336 bp unidentified QT-ELE-00-002 68 bp View
MO576459.1 emblrelpat Sequence 3 from patent US 10501752. 6387 bp unidentified QT-ELE-00-002 68 bp View
MO576477.1 emblrelpat Sequence 21 from patent US 10501752. 10471 bp unidentified QT-ELE-00-002 68 bp View
MO693597.1 emblrelpat Sequence 38 from patent US 10538777. 15162 bp unidentified QT-ELE-00-002 68 bp View
MO693598.1 emblrelpat Sequence 39 from patent US 10538777. 15162 bp unidentified QT-ELE-00-002 68 bp View
MO887847.1 emblrelpat Sequence 6 from patent US 10562944. 552 bp unidentified QT-ELE-00-002 68 bp View
MO929846.1 emblrelpat Sequence 88 from patent US 10577616. 5103 bp unidentified QT-ELE-00-002 68 bp View
MO929847.1 emblrelpat Sequence 89 from patent US 10577616. 8802 bp unidentified QT-ELE-00-002 68 bp View
MO929848.1 emblrelpat Sequence 90 from patent US 10577616. 10272 bp unidentified QT-ELE-00-002 68 bp View
MO929849.1 emblrelpat Sequence 91 from patent US 10577616. 9958 bp unidentified QT-ELE-00-002 68 bp View
MO929850.1 emblrelpat Sequence 92 from patent US 10577616. 10735 bp unidentified QT-ELE-00-002 68 bp View
MO929851.1 emblrelpat Sequence 93 from patent US 10577616. 10421 bp unidentified QT-ELE-00-002 68 bp View
MO929852.1 emblrelpat Sequence 208 from patent US 10577616. 10272 bp unidentified QT-ELE-00-002 68 bp View
MO929853.1 emblrelpat Sequence 209 from patent US 10577616. 8774 bp unidentified QT-ELE-00-002 68 bp View
MO929854.1 emblrelpat Sequence 210 from patent US 10577616. 9491 bp unidentified QT-ELE-00-002 68 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.