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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1578 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
LZ232554.1 emblrelpat JP 2017184747-A/32: Production of D... 39183 bp synthetic construct QT-ELE-00-002 68 bp View
LZ232555.1 emblrelpat JP 2017184747-A/33: Production of D... 38742 bp synthetic construct QT-ELE-00-002 68 bp View
LZ232556.1 emblrelpat JP 2017184747-A/34: Production of D... 38760 bp synthetic construct QT-ELE-00-002 68 bp View
LZ232557.1 emblrelpat JP 2017184747-A/35: Production of D... 34862 bp synthetic construct QT-ELE-00-002 68 bp View
LZ232558.1 emblrelpat JP 2017184747-A/36: Production of D... 34404 bp synthetic construct QT-ELE-00-002 68 bp View
LZ232559.1 emblrelpat JP 2017184747-A/37: Production of D... 38762 bp synthetic construct QT-ELE-00-002 68 bp View
LZ232560.1 emblrelpat JP 2017184747-A/38: Production of D... 35836 bp synthetic construct QT-ELE-00-002 68 bp View
LZ232561.1 emblrelpat JP 2017184747-A/39: Production of D... 47165 bp synthetic construct QT-ELE-00-002 68 bp View
LZ232562.1 emblrelpat JP 2017184747-A/40: Production of D... 46978 bp synthetic construct QT-ELE-00-002 68 bp View
LZ232563.1 emblrelpat JP 2017184747-A/41: Production of D... 41726 bp synthetic construct QT-ELE-00-002 68 bp View
LZ232564.1 emblrelpat JP 2017184747-A/42: Production of D... 36797 bp synthetic construct QT-ELE-00-002 68 bp View
LZ232565.1 emblrelpat JP 2017184747-A/43: Production of D... 42674 bp synthetic construct QT-ELE-00-002 68 bp View
LZ232566.1 emblrelpat JP 2017184747-A/44: Production of D... 40406 bp synthetic construct QT-ELE-00-002 68 bp View
LZ232567.1 emblrelpat JP 2017184747-A/45: Production of D... 39630 bp synthetic construct QT-ELE-00-002 68 bp View
LZ232568.1 emblrelpat JP 2017184747-A/46: Production of D... 36936 bp synthetic construct QT-ELE-00-002 68 bp View
LZ232569.1 emblrelpat JP 2017184747-A/47: Production of D... 36767 bp synthetic construct QT-ELE-00-002 68 bp View
LZ232570.1 emblrelpat JP 2017184747-A/48: Production of D... 35494 bp synthetic construct QT-ELE-00-002 68 bp View
LZ232571.1 emblrelpat JP 2017184747-A/49: Production of D... 37935 bp synthetic construct QT-ELE-00-002 68 bp View
LZ232572.1 emblrelpat JP 2017184747-A/50: Production of D... 38239 bp synthetic construct QT-ELE-00-002 68 bp View
LZ232573.1 emblrelpat JP 2017184747-A/51: Production of D... 34850 bp synthetic construct QT-ELE-00-002 68 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.