European Commission logo
Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 1578 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
LY641893.1 emblrelpat KR 1020180127526-A/36: PRODUCTION O... 36102 bp synthetic construct QT-ELE-00-002 68 bp View
LY641894.1 emblrelpat KR 1020180127526-A/37: PRODUCTION O... 39183 bp synthetic construct QT-ELE-00-002 68 bp View
LY641895.1 emblrelpat KR 1020180127526-A/38: PRODUCTION O... 38742 bp synthetic construct QT-ELE-00-002 68 bp View
LY641896.1 emblrelpat KR 1020180127526-A/39: PRODUCTION O... 38760 bp synthetic construct QT-ELE-00-002 68 bp View
LY641897.1 emblrelpat KR 1020180127526-A/40: PRODUCTION O... 34862 bp synthetic construct QT-ELE-00-002 68 bp View
LY641898.1 emblrelpat KR 1020180127526-A/41: PRODUCTION O... 34404 bp synthetic construct QT-ELE-00-002 68 bp View
LY641899.1 emblrelpat KR 1020180127526-A/42: PRODUCTION O... 38762 bp synthetic construct QT-ELE-00-002 68 bp View
LY641900.1 emblrelpat KR 1020180127526-A/43: PRODUCTION O... 35836 bp synthetic construct QT-ELE-00-002 68 bp View
LY641901.1 emblrelpat KR 1020180127526-A/44: PRODUCTION O... 47165 bp synthetic construct QT-ELE-00-002 68 bp View
LY641902.1 emblrelpat KR 1020180127526-A/45: PRODUCTION O... 46978 bp synthetic construct QT-ELE-00-002 68 bp View
LY641903.1 emblrelpat KR 1020180127526-A/46: PRODUCTION O... 41726 bp synthetic construct QT-ELE-00-002 68 bp View
LY641904.1 emblrelpat KR 1020180127526-A/47: PRODUCTION O... 36797 bp synthetic construct QT-ELE-00-002 68 bp View
LY641905.1 emblrelpat KR 1020180127526-A/48: PRODUCTION O... 42674 bp synthetic construct QT-ELE-00-002 68 bp View
LY641906.1 emblrelpat KR 1020180127526-A/49: PRODUCTION O... 40406 bp synthetic construct QT-ELE-00-002 68 bp View
LY641907.1 emblrelpat KR 1020180127526-A/50: PRODUCTION O... 39630 bp synthetic construct QT-ELE-00-002 68 bp View
LY641908.1 emblrelpat KR 1020180127526-A/51: PRODUCTION O... 36936 bp synthetic construct QT-ELE-00-002 68 bp View
LY641909.1 emblrelpat KR 1020180127526-A/52: PRODUCTION O... 36767 bp synthetic construct QT-ELE-00-002 68 bp View
LY641910.1 emblrelpat KR 1020180127526-A/53: PRODUCTION O... 35494 bp synthetic construct QT-ELE-00-002 68 bp View
LY641911.1 emblrelpat KR 1020180127526-A/54: PRODUCTION O... 37935 bp synthetic construct QT-ELE-00-002 68 bp View
LY641912.1 emblrelpat KR 1020180127526-A/55: PRODUCTION O... 38239 bp synthetic construct QT-ELE-00-002 68 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.